Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Gm11660-201ENSMUST00000120955 412 ntBASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Cts7-204ENSMUST00000225321 1257 ntBASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gm9192-201ENSMUST00000183221 985 ntBASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gm43962-201ENSMUST00000203898 190 ntBASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gm45865-201ENSMUST00000211815 945 ntBASIC11.78□□□□□ -0.52
Vps39Q8R5L3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gm2553-201ENSMUST00000215986 605 ntBASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps39Q8R5L3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps39Q8R5L3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps39Q8R5L3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps39Q8R5L3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps39Q8R5L3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vps39Q8R5L3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vps39Q8R5L3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vps39Q8R5L3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps39Q8R5L3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Vps39Q8R5L3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps39Q8R5L3 Gm44364-201ENSMUST00000198368 141 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms