Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdt1Q8R4E9 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdt1Q8R4E9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Gm14460-201ENSMUST00000121511 639 ntBASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Gm8365-201ENSMUST00000197334 648 ntBASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Gm1821-202ENSMUST00000227415 750 ntBASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdt1Q8R4E9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Gm23912-201ENSMUST00000104687 87 ntBASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Gm13035-201ENSMUST00000117496 342 ntBASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Rprl1-201ENSMUST00000158050 327 ntBASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdt1Q8R4E9 Gm17391-201ENSMUST00000171036 126 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms