Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.88□□□□□ -0.51
Clip4Q8CI96 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.88□□□□□ -0.51
Clip4Q8CI96 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Gm2260-201ENSMUST00000184965 657 ntBASIC11.88□□□□□ -0.51
Clip4Q8CI96 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Gm44882-201ENSMUST00000205702 802 ntBASIC11.88□□□□□ -0.51
Clip4Q8CI96 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.88□□□□□ -0.51
Clip4Q8CI96 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.88□□□□□ -0.51
Clip4Q8CI96 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clip4Q8CI96 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.87□□□□□ -0.51
Clip4Q8CI96 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Gm8913-201ENSMUST00000209491 641 ntBASIC11.87□□□□□ -0.51
Clip4Q8CI96 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.87□□□□□ -0.51
Clip4Q8CI96 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clip4Q8CI96 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Clip4Q8CI96 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clip4Q8CI96 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.86□□□□□ -0.51
Clip4Q8CI96 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clip4Q8CI96 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clip4Q8CI96 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clip4Q8CI96 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clip4Q8CI96 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms