Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
ShfQ8CG80 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
ShfQ8CG80 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.47□□□□□ -0.73
ShfQ8CG80 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
ShfQ8CG80 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.47□□□□□ -0.73
ShfQ8CG80 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.47□□□□□ -0.73
ShfQ8CG80 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 Gm8885-201ENSMUST00000189382 598 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 Gm31256-201ENSMUST00000194705 506 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
ShfQ8CG80 Gm2553-201ENSMUST00000215986 605 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.47□□□□□ -0.73
ShfQ8CG80 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Gm5705-201ENSMUST00000066241 711 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
ShfQ8CG80 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
ShfQ8CG80 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
ShfQ8CG80 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
ShfQ8CG80 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.47□□□□□ -0.73
ShfQ8CG80 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
ShfQ8CG80 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ShfQ8CG80 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.46□□□□□ -0.73
ShfQ8CG80 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.46□□□□□ -0.73
ShfQ8CG80 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.46□□□□□ -0.73
ShfQ8CG80 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Gm14109-201ENSMUST00000118814 309 ntBASIC10.46□□□□□ -0.73
ShfQ8CG80 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
ShfQ8CG80 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
ShfQ8CG80 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.46□□□□□ -0.73
ShfQ8CG80 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.46□□□□□ -0.73
ShfQ8CG80 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.46□□□□□ -0.73
ShfQ8CG80 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
ShfQ8CG80 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.46□□□□□ -0.73
ShfQ8CG80 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.46□□□□□ -0.73
ShfQ8CG80 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ShfQ8CG80 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.46□□□□□ -0.74
ShfQ8CG80 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.46□□□□□ -0.74
ShfQ8CG80 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms