Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Gm4984-201ENSMUST00000115987 360 ntBASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13570-201ENSMUST00000140763 309 ntBASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Rprl1-201ENSMUST00000158050 327 ntBASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Gm6745-201ENSMUST00000199216 526 ntBASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc28bQ8CEG5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.65□□□□□ -0.55
Ccdc28bQ8CEG5 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc28bQ8CEG5 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc28bQ8CEG5 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc28bQ8CEG5 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm15610-201ENSMUST00000120584 195 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm15806-201ENSMUST00000120696 955 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm16177-201ENSMUST00000120728 718 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm1335-201ENSMUST00000121653 386 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm17931-201ENSMUST00000208132 634 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc28bQ8CEG5 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms