Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Mir877-201ENSMUST00000104738 85 ntBASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.12□□□□□ -0.47
Trub1Q8C0D0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Gm27530-201ENSMUST00000184096 98 ntBASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Mir6420-201ENSMUST00000185032 102 ntBASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Rps4l-202ENSMUST00000204242 789 ntBASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trub1Q8C0D0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Gm12857-201ENSMUST00000117678 592 ntBASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Gm14208-201ENSMUST00000119645 678 ntBASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Mir8093-201ENSMUST00000185043 137 ntBASIC12.11□□□□□ -0.47
Trub1Q8C0D0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Gm8385-201ENSMUST00000058999 643 ntBASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Gm8420-201ENSMUST00000097103 598 ntBASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trub1Q8C0D0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms