Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Gm11989-201ENSMUST00000117240 672 ntBASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Gm11362-201ENSMUST00000118838 850 ntBASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Rprl1-201ENSMUST00000158050 327 ntBASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Gm37666-201ENSMUST00000194110 866 ntBASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4Q8BQZ5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Gm14028-201ENSMUST00000117434 479 ntBASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Gm24749-201ENSMUST00000157838 343 ntBASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Gm9136-201ENSMUST00000193368 454 ntBASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Gm18711-201ENSMUST00000199341 750 ntBASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Gm18212-201ENSMUST00000211678 889 ntBASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Gm8385-201ENSMUST00000058999 643 ntBASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cpsf4Q8BQZ5 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms