Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.29□□□□□ -0.6
Vrk1Q80X41 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vrk1Q80X41 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.28□□□□□ -0.6
Vrk1Q80X41 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.28□□□□□ -0.6
Vrk1Q80X41 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm38117-201ENSMUST00000194653 939 ntBASIC11.28□□□□□ -0.6
Vrk1Q80X41 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.28□□□□□ -0.6
Vrk1Q80X41 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.28□□□□□ -0.6
Vrk1Q80X41 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.28□□□□□ -0.6
Vrk1Q80X41 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Vrk1Q80X41 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vrk1Q80X41 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vrk1Q80X41 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vrk1Q80X41 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vrk1Q80X41 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vrk1Q80X41 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Vrk1Q80X41 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vrk1Q80X41 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Gm1848-201ENSMUST00000120711 789 ntBASIC11.27□□□□□ -0.61
Vrk1Q80X41 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.27□□□□□ -0.61
Vrk1Q80X41 Gm11836-201ENSMUST00000121022 441 ntBASIC11.27□□□□□ -0.61
Vrk1Q80X41 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.27□□□□□ -0.61
Vrk1Q80X41 Gm28324-201ENSMUST00000187913 264 ntBASIC11.27□□□□□ -0.61
Vrk1Q80X41 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.27□□□□□ -0.61
Vrk1Q80X41 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.27□□□□□ -0.61
Vrk1Q80X41 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.27□□□□□ -0.61
Vrk1Q80X41 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.27□□□□□ -0.61
Vrk1Q80X41 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vrk1Q80X41 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Vrk1Q80X41 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms