Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim62Q80V85 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim62Q80V85 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim62Q80V85 Gm23251-201ENSMUST00000103773 110 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Gm12566-201ENSMUST00000121479 359 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trim62Q80V85 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Gm26461-201ENSMUST00000175064 290 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Gm10807-201ENSMUST00000177134 795 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim62Q80V85 Gm38314-201ENSMUST00000195709 625 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Gm45113-201ENSMUST00000207518 165 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Spcs1-203ENSMUST00000226374 592 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim62Q80V85 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.18□□□□□ -0.46
Trim62Q80V85 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim62Q80V85 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim62Q80V85 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim62Q80V85 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim62Q80V85 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim62Q80V85 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim62Q80V85 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trim62Q80V85 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trim62Q80V85 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim62Q80V85 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim62Q80V85 Gm38151-201ENSMUST00000195085 289 ntBASIC12.17□□□□□ -0.46
Trim62Q80V85 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.17□□□□□ -0.46
Trim62Q80V85 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.17□□□□□ -0.46
Trim62Q80V85 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.17□□□□□ -0.46
Trim62Q80V85 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim62Q80V85 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim62Q80V85 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim62Q80V85 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim62Q80V85 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trim62Q80V85 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trim62Q80V85 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim62Q80V85 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim62Q80V85 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim62Q80V85 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim62Q80V85 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim62Q80V85 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms