Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh8Q7TSK3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.55
Pcdh8Q7TSK3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Pcdh8Q7TSK3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh8Q7TSK3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh8Q7TSK3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh8Q7TSK3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdh8Q7TSK3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm15004-201ENSMUST00000119192 630 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm14665-201ENSMUST00000122294 557 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Mir7686-201ENSMUST00000200604 57 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm43916-201ENSMUST00000205062 967 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm9132-201ENSMUST00000210182 832 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm10179-201ENSMUST00000086233 688 ntBASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh8Q7TSK3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Gm13888-201ENSMUST00000119148 422 ntBASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Gm15573-201ENSMUST00000119487 540 ntBASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Gm12029-201ENSMUST00000120073 832 ntBASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Gm13263-201ENSMUST00000121271 838 ntBASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Mir6546-201ENSMUST00000184460 62 ntBASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Gm19287-201ENSMUST00000203190 358 ntBASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms