Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Gm10807-201ENSMUST00000177134 795 ntBASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.49□□□□□ -0.57
Ubfd1Q78JW9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Gm21092-201ENSMUST00000178995 955 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Mir8093-201ENSMUST00000185043 137 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Gm5982-201ENSMUST00000196234 512 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Gm43186-201ENSMUST00000198130 824 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Gm44126-201ENSMUST00000204831 514 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubfd1Q78JW9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ubfd1Q78JW9 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubfd1Q78JW9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubfd1Q78JW9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubfd1Q78JW9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubfd1Q78JW9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubfd1Q78JW9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubfd1Q78JW9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms