Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm12579-201ENSMUST00000118040 783 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm15207-201ENSMUST00000119259 442 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm5714-201ENSMUST00000197343 566 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm18893-201ENSMUST00000198416 943 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.43□□□□□ -0.1
Pdzrn3Q69ZS0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Gm43520-201ENSMUST00000197996 164 ntBASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.42□□□□□ -0.1
Pdzrn3Q69ZS0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms