Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Olfr1032-203ENSMUST00000111589 1393 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Mir669p-2-201ENSMUST00000103868 87 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 Mir669p-1-201ENSMUST00000103884 87 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm6621-201ENSMUST00000193251 772 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm10176-201ENSMUST00000159707 2264 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.03□□□□□ -0.96
Foxc1Q61572 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Foxc1Q61572 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Foxc1Q61572 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.02□□□□□ -0.96
Foxc1Q61572 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Foxc1Q61572 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Foxc1Q61572 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Foxc1Q61572 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms