Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm19587-201ENSMUST00000191395 545 ntBASIC12.99□□□□□ -0.33
Ecm1Q61508 Gm25053-202ENSMUST00000199731 132 ntBASIC12.99□□□□□ -0.33
Ecm1Q61508 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ecm1Q61508 Gm6722-201ENSMUST00000221586 390 ntBASIC12.99□□□□□ -0.33
Ecm1Q61508 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ecm1Q61508 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.99□□□□□ -0.33
Ecm1Q61508 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ecm1Q61508 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ecm1Q61508 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.99□□□□□ -0.33
Ecm1Q61508 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ecm1Q61508 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.99□□□□□ -0.33
Ecm1Q61508 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ecm1Q61508 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ecm1Q61508 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ecm1Q61508 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ecm1Q61508 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.98□□□□□ -0.33
Ecm1Q61508 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ecm1Q61508 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ecm1Q61508 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ecm1Q61508 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.98□□□□□ -0.33
Ecm1Q61508 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ecm1Q61508 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.98□□□□□ -0.33
Ecm1Q61508 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.98□□□□□ -0.33
Ecm1Q61508 Gm38314-201ENSMUST00000195709 625 ntBASIC12.98□□□□□ -0.33
Ecm1Q61508 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.98□□□□□ -0.33
Ecm1Q61508 Gm7082-201ENSMUST00000209880 969 ntBASIC12.98□□□□□ -0.33
Ecm1Q61508 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ecm1Q61508 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ecm1Q61508 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Ecm1Q61508 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Ecm1Q61508 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.98□□□□□ -0.33
Ecm1Q61508 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ecm1Q61508 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ecm1Q61508 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ecm1Q61508 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm11560-201ENSMUST00000117567 948 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm13351-201ENSMUST00000118087 414 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm9673-201ENSMUST00000119287 781 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm15374-201ENSMUST00000119313 844 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm4862-201ENSMUST00000170405 438 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm23694-201ENSMUST00000179335 110 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm28833-201ENSMUST00000189671 559 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.97□□□□□ -0.33
Ecm1Q61508 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ecm1Q61508 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms