Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
ClpbQ60649 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
ClpbQ60649 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
ClpbQ60649 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.33□□□□□ -0.6
ClpbQ60649 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.33□□□□□ -0.6
ClpbQ60649 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ClpbQ60649 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.33□□□□□ -0.6
ClpbQ60649 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
ClpbQ60649 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
ClpbQ60649 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.33□□□□□ -0.6
ClpbQ60649 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.33□□□□□ -0.6
ClpbQ60649 Gm14247-201ENSMUST00000120950 237 ntBASIC11.33□□□□□ -0.6
ClpbQ60649 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.33□□□□□ -0.6
ClpbQ60649 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.33□□□□□ -0.6
ClpbQ60649 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.33□□□□□ -0.6
ClpbQ60649 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.33□□□□□ -0.6
ClpbQ60649 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.33□□□□□ -0.6
ClpbQ60649 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.33□□□□□ -0.6
ClpbQ60649 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Gm17827-201ENSMUST00000211825 742 ntBASIC11.33□□□□□ -0.6
ClpbQ60649 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.33□□□□□ -0.6
ClpbQ60649 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ClpbQ60649 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.33□□□□□ -0.6
ClpbQ60649 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
ClpbQ60649 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
ClpbQ60649 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ClpbQ60649 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.32□□□□□ -0.6
ClpbQ60649 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ClpbQ60649 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
ClpbQ60649 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.32□□□□□ -0.6
ClpbQ60649 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ClpbQ60649 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.32□□□□□ -0.6
ClpbQ60649 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
ClpbQ60649 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.32□□□□□ -0.6
ClpbQ60649 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.32□□□□□ -0.6
ClpbQ60649 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ClpbQ60649 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.32□□□□□ -0.6
ClpbQ60649 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.32□□□□□ -0.6
ClpbQ60649 Gm5616-201ENSMUST00000165252 384 ntBASIC11.32□□□□□ -0.6
ClpbQ60649 Gm8741-201ENSMUST00000174736 384 ntBASIC11.32□□□□□ -0.6
ClpbQ60649 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.32□□□□□ -0.6
ClpbQ60649 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.32□□□□□ -0.6
ClpbQ60649 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.32□□□□□ -0.6
ClpbQ60649 Nsd1-205ENSMUST00000224693 852 ntBASIC11.32□□□□□ -0.6
ClpbQ60649 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ClpbQ60649 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
ClpbQ60649 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClpbQ60649 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.31□□□□□ -0.6
ClpbQ60649 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms