Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.63□□□□□ -0.55
Scn2bQ56A07 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.63□□□□□ -0.55
Scn2bQ56A07 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scn2bQ56A07 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.62□□□□□ -0.55
Scn2bQ56A07 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.62□□□□□ -0.55
Scn2bQ56A07 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Mir877-201ENSMUST00000104738 85 ntBASIC11.62□□□□□ -0.55
Scn2bQ56A07 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm12015-201ENSMUST00000117065 843 ntBASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm13097-201ENSMUST00000210722 397 ntBASIC11.62□□□□□ -0.55
Scn2bQ56A07 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.62□□□□□ -0.55
Scn2bQ56A07 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn2bQ56A07 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.62□□□□□ -0.55
Scn2bQ56A07 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Scn2bQ56A07 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Scn2bQ56A07 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.61□□□□□ -0.55
Scn2bQ56A07 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn2bQ56A07 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.61□□□□□ -0.55
Scn2bQ56A07 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Scn2bQ56A07 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Scn2bQ56A07 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scn2bQ56A07 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Scn2bQ56A07 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn2bQ56A07 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn2bQ56A07 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn2bQ56A07 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn2bQ56A07 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms