Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.03□□□□□ -0.48
Spire1Q52KF3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spire1Q52KF3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spire1Q52KF3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spire1Q52KF3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Spire1Q52KF3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spire1Q52KF3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Spire1Q52KF3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Spire1Q52KF3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Spire1Q52KF3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Spire1Q52KF3 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.02□□□□□ -0.48
Spire1Q52KF3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Spire1Q52KF3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Spire1Q52KF3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
Spire1Q52KF3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Spire1Q52KF3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Spire1Q52KF3 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.02□□□□□ -0.48
Spire1Q52KF3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Spire1Q52KF3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Spire1Q52KF3 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.02□□□□□ -0.48
Spire1Q52KF3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spire1Q52KF3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Spire1Q52KF3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Gm26134-201ENSMUST00000178484 110 ntBASIC12.02□□□□□ -0.49
Spire1Q52KF3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Gm3793-201ENSMUST00000204973 672 ntBASIC12.02□□□□□ -0.49
Spire1Q52KF3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.02□□□□□ -0.49
Spire1Q52KF3 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spire1Q52KF3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.01□□□□□ -0.49
Spire1Q52KF3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Gm11675-201ENSMUST00000121873 832 ntBASIC12.01□□□□□ -0.49
Spire1Q52KF3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.01□□□□□ -0.49
Spire1Q52KF3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.01□□□□□ -0.49
Spire1Q52KF3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.01□□□□□ -0.49
Spire1Q52KF3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spire1Q52KF3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms