Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Gm5706-201ENSMUST00000181525 993 ntBASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Gm43818-201ENSMUST00000200605 466 ntBASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Gm18584-201ENSMUST00000203098 964 ntBASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Gm39404-201ENSMUST00000216350 313 ntBASIC11.03□□□□□ -0.64
Trim40Q3UWA4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim40Q3UWA4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim40Q3UWA4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim40Q3UWA4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim40Q3UWA4 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim40Q3UWA4 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim40Q3UWA4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Gm1335-201ENSMUST00000121653 386 ntBASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Gm14441-201ENSMUST00000121960 540 ntBASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Gm5035-201ENSMUST00000215581 927 ntBASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Gm10254-201ENSMUST00000052888 867 ntBASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.02□□□□□ -0.65
Trim40Q3UWA4 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Gm13736-201ENSMUST00000119272 253 ntBASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Gm11700-201ENSMUST00000119409 403 ntBASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Gm14247-201ENSMUST00000120950 237 ntBASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.01□□□□□ -0.65
Trim40Q3UWA4 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trim40Q3UWA4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms