Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gm12990-201ENSMUST00000120372 468 ntBASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gm7741-201ENSMUST00000181445 989 ntBASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gm37826-201ENSMUST00000195329 322 ntBASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upf3aQ3ULJ3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Pck2-205ENSMUST00000226352 2784 ntBASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upf3aQ3ULJ3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms