Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Gm25343-201ENSMUST00000157460 107 ntBASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Gm38007-201ENSMUST00000192187 313 ntBASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vars2Q3U2A8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm23647-201ENSMUST00000175042 109 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Rn5s-201ENSMUST00000177555 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s108-201ENSMUST00000177575 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s121-201ENSMUST00000177589 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s146-201ENSMUST00000177889 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm22109-201ENSMUST00000177995 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm22291-201ENSMUST00000178027 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s141-201ENSMUST00000178066 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm23284-201ENSMUST00000178069 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s100-201ENSMUST00000178106 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s111-201ENSMUST00000178203 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s105-201ENSMUST00000178499 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s149-201ENSMUST00000178520 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s103-201ENSMUST00000178755 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s123-201ENSMUST00000178804 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s142-201ENSMUST00000178820 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s144-201ENSMUST00000178859 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s139-201ENSMUST00000178975 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s134-201ENSMUST00000178983 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s136-201ENSMUST00000179080 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm25018-201ENSMUST00000179081 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s104-201ENSMUST00000179107 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s113-201ENSMUST00000179143 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s133-201ENSMUST00000179275 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s117-201ENSMUST00000179431 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm25212-201ENSMUST00000179432 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s138-201ENSMUST00000179476 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s122-201ENSMUST00000179500 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s143-201ENSMUST00000179542 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s107-201ENSMUST00000179704 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm26391-201ENSMUST00000179843 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s110-201ENSMUST00000179995 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s128-201ENSMUST00000180096 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 n-R5s124-201ENSMUST00000180334 119 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Mir6359-201ENSMUST00000183668 81 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 AC114573.1-201ENSMUST00000224120 1210 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 AC154213.1-201ENSMUST00000228234 583 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Gm24089-201ENSMUST00000093696 109 ntBASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vars2Q3U2A8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 604.4 ms