Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Tff1Q08423 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.81□□□□□ -0.84
Tff1Q08423 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tff1Q08423 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tff1Q08423 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Tff1Q08423 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Tff1Q08423 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm43677-201ENSMUST00000198098 2378 ntBASIC9.8□□□□□ -0.84
Tff1Q08423 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.8□□□□□ -0.84
Tff1Q08423 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm12217-201ENSMUST00000118858 696 ntBASIC9.8□□□□□ -0.84
Tff1Q08423 Gm15782-201ENSMUST00000121073 445 ntBASIC9.8□□□□□ -0.84
Tff1Q08423 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.8□□□□□ -0.84
Tff1Q08423 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Tff1Q08423 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.8□□□□□ -0.84
Tff1Q08423 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm38317-201ENSMUST00000195564 343 ntBASIC9.8□□□□□ -0.84
Tff1Q08423 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Tff1Q08423 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.8□□□□□ -0.84
Tff1Q08423 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.8□□□□□ -0.84
Tff1Q08423 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Tff1Q08423 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Tff1Q08423 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Tff1Q08423 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.79□□□□□ -0.84
Tff1Q08423 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.79□□□□□ -0.84
Tff1Q08423 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm12058-201ENSMUST00000118614 437 ntBASIC9.79□□□□□ -0.84
Tff1Q08423 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.79□□□□□ -0.84
Tff1Q08423 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm25043-201ENSMUST00000158604 212 ntBASIC9.79□□□□□ -0.84
Tff1Q08423 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.79□□□□□ -0.84
Tff1Q08423 Gm43378-201ENSMUST00000199336 582 ntBASIC9.79□□□□□ -0.84
Tff1Q08423 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.79□□□□□ -0.84
Tff1Q08423 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.79□□□□□ -0.84
Tff1Q08423 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Tff1Q08423 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Tff1Q08423 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.79□□□□□ -0.84
Tff1Q08423 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Tff1Q08423 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms