Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ebf1Q07802 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ebf1Q07802 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ebf1Q07802 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Gm11660-201ENSMUST00000120955 412 ntBASIC11.97□□□□□ -0.49
Ebf1Q07802 Gm22442-201ENSMUST00000157256 144 ntBASIC11.97□□□□□ -0.49
Ebf1Q07802 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Gm8815-201ENSMUST00000173809 620 ntBASIC11.97□□□□□ -0.49
Ebf1Q07802 Gm25072-201ENSMUST00000175233 235 ntBASIC11.97□□□□□ -0.49
Ebf1Q07802 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Gm8492-201ENSMUST00000182375 987 ntBASIC11.97□□□□□ -0.49
Ebf1Q07802 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Gm45575-201ENSMUST00000210283 548 ntBASIC11.97□□□□□ -0.49
Ebf1Q07802 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC11.97□□□□□ -0.49
Ebf1Q07802 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.97□□□□□ -0.49
Ebf1Q07802 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.97□□□□□ -0.49
Ebf1Q07802 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.97□□□□□ -0.49
Ebf1Q07802 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf1Q07802 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ebf1Q07802 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Map1b-203ENSMUST00000223725 2669 ntBASIC11.96□□□□□ -0.49
Ebf1Q07802 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.96□□□□□ -0.49
Ebf1Q07802 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ebf1Q07802 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ebf1Q07802 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.96□□□□□ -0.49
Ebf1Q07802 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Ebf1Q07802 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.96□□□□□ -0.49
Ebf1Q07802 Gm37299-201ENSMUST00000193951 826 ntBASIC11.96□□□□□ -0.49
Ebf1Q07802 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.96□□□□□ -0.49
Ebf1Q07802 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.96□□□□□ -0.49
Ebf1Q07802 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ebf1Q07802 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.96□□□□□ -0.49
Ebf1Q07802 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf1Q07802 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.96□□□□□ -0.49
Ebf1Q07802 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf1Q07802 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf1Q07802 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf1Q07802 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf1Q07802 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms