Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm29615-201ENSMUST00000185371 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm28224-201ENSMUST00000186078 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm29001-201ENSMUST00000186177 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm28292-201ENSMUST00000186593 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm28101-201ENSMUST00000187608 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm29076-201ENSMUST00000187689 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm28302-201ENSMUST00000187931 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm28646-201ENSMUST00000188220 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm28205-201ENSMUST00000189177 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm29032-201ENSMUST00000189797 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm28695-201ENSMUST00000190300 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm37448-201ENSMUST00000192795 697 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm45224-201ENSMUST00000208203 414 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Lsm6P62313 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Lsm6P62313 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Olfr582-201ENSMUST00000098212 960 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
Lsm6P62313 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.36□□□□□ -0.75
Lsm6P62313 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Lsm6P62313 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Rgr-203ENSMUST00000225070 4704 ntBASIC10.35□□□□□ -0.75
Lsm6P62313 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Lsm6P62313 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.35□□□□□ -0.75
Lsm6P62313 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.35□□□□□ -0.75
Lsm6P62313 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.35□□□□□ -0.75
Lsm6P62313 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Lsm6P62313 Gm7584-201ENSMUST00000175829 940 ntBASIC10.35□□□□□ -0.75
Lsm6P62313 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Lsm6P62313 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.35□□□□□ -0.75
Lsm6P62313 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Lsm6P62313 Gm43184-201ENSMUST00000197247 542 ntBASIC10.35□□□□□ -0.75
Lsm6P62313 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.35□□□□□ -0.75
Lsm6P62313 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Lsm6P62313 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Lsm6P62313 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.35□□□□□ -0.75
Lsm6P62313 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Lsm6P62313 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Lsm6P62313 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Lsm6P62313 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Lsm6P62313 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm6P62313 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Lsm6P62313 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Lsm6P62313 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.34□□□□□ -0.75
Lsm6P62313 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.34□□□□□ -0.75
Lsm6P62313 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms