Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm27572-201ENSMUST00000183702 255 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm42627-201ENSMUST00000197347 224 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm43438-201ENSMUST00000198133 379 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm45880-201ENSMUST00000213041 853 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm19994-201ENSMUST00000217086 586 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.47□□□□□ -0.73
Sf3b6P59708 CT009764.1-201ENSMUST00000222260 483 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.46□□□□□ -0.73
Sf3b6P59708 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Sf3b6P59708 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Sf3b6P59708 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.46□□□□□ -0.73
Sf3b6P59708 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Gm13392-201ENSMUST00000117708 150 ntBASIC10.46□□□□□ -0.73
Sf3b6P59708 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.46□□□□□ -0.73
Sf3b6P59708 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.46□□□□□ -0.73
Sf3b6P59708 Gm6114-201ENSMUST00000182472 968 ntBASIC10.46□□□□□ -0.73
Sf3b6P59708 Gm9192-201ENSMUST00000183221 985 ntBASIC10.46□□□□□ -0.73
Sf3b6P59708 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.46□□□□□ -0.73
Sf3b6P59708 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.46□□□□□ -0.73
Sf3b6P59708 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.46□□□□□ -0.73
Sf3b6P59708 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b6P59708 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.46□□□□□ -0.74
Sf3b6P59708 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.46□□□□□ -0.74
Sf3b6P59708 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.74
Sf3b6P59708 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.46□□□□□ -0.74
Sf3b6P59708 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Sf3b6P59708 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b6P59708 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Sf3b6P59708 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.45□□□□□ -0.74
Sf3b6P59708 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms