Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tubgcp3P58854 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.02□□□□□ -0.48
Tubgcp3P58854 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubgcp3P58854 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Gm26286-201ENSMUST00000104166 134 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Gm15004-201ENSMUST00000119192 630 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Gm9192-201ENSMUST00000183221 985 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Tubgcp3P58854 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tubgcp3P58854 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.02□□□□□ -0.49
Tubgcp3P58854 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubgcp3P58854 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.01□□□□□ -0.49
Tubgcp3P58854 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubgcp3P58854 Gm25668-201ENSMUST00000157700 129 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms