Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2e3P52483 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube2e3P52483 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Gm23949-201ENSMUST00000104027 127 ntBASIC11.28□□□□□ -0.6
Ube2e3P52483 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.28□□□□□ -0.6
Ube2e3P52483 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.28□□□□□ -0.6
Ube2e3P52483 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Gm24749-201ENSMUST00000157838 343 ntBASIC11.28□□□□□ -0.6
Ube2e3P52483 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ube2e3P52483 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Gm38314-201ENSMUST00000195709 625 ntBASIC11.28□□□□□ -0.6
Ube2e3P52483 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Gm9797-202ENSMUST00000218003 294 ntBASIC11.28□□□□□ -0.6
Ube2e3P52483 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube2e3P52483 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ube2e3P52483 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ube2e3P52483 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ube2e3P52483 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.27□□□□□ -0.6
Ube2e3P52483 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ube2e3P52483 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ube2e3P52483 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Ube2e3P52483 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ube2e3P52483 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ube2e3P52483 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.27□□□□□ -0.6
Ube2e3P52483 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ube2e3P52483 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Ube2e3P52483 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ube2e3P52483 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Mir877-201ENSMUST00000104738 85 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ube2e3P52483 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm28937-201ENSMUST00000185413 695 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm29400-201ENSMUST00000187208 695 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm28662-201ENSMUST00000188446 695 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm28251-201ENSMUST00000188835 695 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm37666-201ENSMUST00000194110 866 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm37318-201ENSMUST00000194325 695 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm38117-201ENSMUST00000194653 939 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm38017-201ENSMUST00000194768 695 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm37287-201ENSMUST00000195449 695 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm37793-201ENSMUST00000195548 695 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm18212-201ENSMUST00000211678 889 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm18730-201ENSMUST00000218038 343 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm807-202ENSMUST00000224929 408 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ube2e3P52483 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.27□□□□□ -0.61
Ube2e3P52483 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.27□□□□□ -0.61
Ube2e3P52483 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Ube2e3P52483 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube2e3P52483 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube2e3P52483 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms