Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.19□□□□□ -0.62
RoraP51448 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.19□□□□□ -0.62
RoraP51448 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
RoraP51448 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
RoraP51448 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
RoraP51448 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.19□□□□□ -0.62
RoraP51448 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.19□□□□□ -0.62
RoraP51448 Gm15595-201ENSMUST00000120840 961 ntBASIC11.19□□□□□ -0.62
RoraP51448 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.19□□□□□ -0.62
RoraP51448 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
RoraP51448 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.19□□□□□ -0.62
RoraP51448 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
RoraP51448 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
RoraP51448 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
RoraP51448 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.18□□□□□ -0.62
RoraP51448 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
RoraP51448 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Gm15131-201ENSMUST00000119124 595 ntBASIC11.18□□□□□ -0.62
RoraP51448 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Gm13263-201ENSMUST00000121271 838 ntBASIC11.18□□□□□ -0.62
RoraP51448 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 Gm43916-201ENSMUST00000205062 967 ntBASIC11.18□□□□□ -0.62
RoraP51448 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Gm17931-201ENSMUST00000208132 634 ntBASIC11.18□□□□□ -0.62
RoraP51448 Gm45575-201ENSMUST00000210283 548 ntBASIC11.18□□□□□ -0.62
RoraP51448 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.18□□□□□ -0.62
RoraP51448 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.18□□□□□ -0.62
RoraP51448 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
RoraP51448 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms