Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx2P43241 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx2P43241 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdx2P43241 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cdx2P43241 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx2P43241 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx2P43241 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx2P43241 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cdx2P43241 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx2P43241 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx2P43241 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx2P43241 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx2P43241 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.18□□□□□ -0.62
Cdx2P43241 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.18□□□□□ -0.62
Cdx2P43241 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cdx2P43241 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.17□□□□□ -0.62
Cdx2P43241 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cdx2P43241 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Cdx2P43241 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Gm8723-201ENSMUST00000166076 820 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 Gm8701-201ENSMUST00000169259 874 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.17□□□□□ -0.62
Cdx2P43241 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.17□□□□□ -0.62
Cdx2P43241 Mir8093-201ENSMUST00000185043 137 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.17□□□□□ -0.62
Cdx2P43241 Gm43778-201ENSMUST00000199438 199 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 Gm43380-201ENSMUST00000200421 220 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.17□□□□□ -0.62
Cdx2P43241 Gm30671-201ENSMUST00000214898 318 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.17□□□□□ -0.62
Cdx2P43241 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Gm10263-201ENSMUST00000085163 300 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cdx2P43241 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cdx2P43241 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.17□□□□□ -0.62
Cdx2P43241 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.17□□□□□ -0.62
Cdx2P43241 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx2P43241 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdx2P43241 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdx2P43241 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.16□□□□□ -0.62
Cdx2P43241 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Cdx2P43241 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cdx2P43241 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Gm13351-201ENSMUST00000118087 414 ntBASIC11.16□□□□□ -0.62
Cdx2P43241 Gm12036-201ENSMUST00000120008 530 ntBASIC11.16□□□□□ -0.62
Cdx2P43241 Gm22379-201ENSMUST00000157480 131 ntBASIC11.16□□□□□ -0.62
Cdx2P43241 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.16□□□□□ -0.62
Cdx2P43241 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cdx2P43241 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.16□□□□□ -0.62
Cdx2P43241 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.16□□□□□ -0.62
Cdx2P43241 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdx2P43241 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.16□□□□□ -0.62
Cdx2P43241 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.16□□□□□ -0.62
Cdx2P43241 Gm18460-201ENSMUST00000208088 464 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms