Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.61□□□□□ -0.55
Cd9P40240 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Gm3329-201ENSMUST00000159873 556 ntBASIC11.61□□□□□ -0.55
Cd9P40240 Gm8100-201ENSMUST00000182906 988 ntBASIC11.61□□□□□ -0.55
Cd9P40240 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Gm28686-201ENSMUST00000187404 609 ntBASIC11.61□□□□□ -0.55
Cd9P40240 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.61□□□□□ -0.55
Cd9P40240 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.61□□□□□ -0.55
Cd9P40240 Gm18212-201ENSMUST00000211678 889 ntBASIC11.61□□□□□ -0.55
Cd9P40240 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.61□□□□□ -0.55
Cd9P40240 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.61□□□□□ -0.55
Cd9P40240 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cd9P40240 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cd9P40240 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Cd9P40240 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.61□□□□□ -0.55
Cd9P40240 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cd9P40240 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.6□□□□□ -0.55
Cd9P40240 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cd9P40240 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cd9P40240 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.6□□□□□ -0.55
Cd9P40240 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.6□□□□□ -0.55
Cd9P40240 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.6□□□□□ -0.55
Cd9P40240 Mir877-201ENSMUST00000104738 85 ntBASIC11.6□□□□□ -0.55
Cd9P40240 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
Cd9P40240 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Cd9P40240 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Gm25881-201ENSMUST00000157783 103 ntBASIC11.6□□□□□ -0.55
Cd9P40240 Gm23085-201ENSMUST00000157849 293 ntBASIC11.6□□□□□ -0.55
Cd9P40240 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.6□□□□□ -0.55
Cd9P40240 Gm4482-201ENSMUST00000200876 742 ntBASIC11.6□□□□□ -0.55
Cd9P40240 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.6□□□□□ -0.55
Cd9P40240 Gm45113-201ENSMUST00000207518 165 ntBASIC11.6□□□□□ -0.55
Cd9P40240 Gm18730-201ENSMUST00000218038 343 ntBASIC11.6□□□□□ -0.55
Cd9P40240 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.6□□□□□ -0.55
Cd9P40240 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.6□□□□□ -0.55
Cd9P40240 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Gm8385-201ENSMUST00000058999 643 ntBASIC11.6□□□□□ -0.55
Cd9P40240 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cd9P40240 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Cd9P40240 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cd9P40240 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.6□□□□□ -0.55
Cd9P40240 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.6□□□□□ -0.55
Cd9P40240 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd9P40240 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd9P40240 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd9P40240 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms