Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.1□□□□□ -0.47
Cxcl12P40224 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm23612-201ENSMUST00000103823 110 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm24279-201ENSMUST00000104236 131 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm6158-201ENSMUST00000109467 904 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm15549-201ENSMUST00000121595 622 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm13981-201ENSMUST00000122360 447 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm25492-201ENSMUST00000157383 129 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm17221-201ENSMUST00000163909 481 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm17073-201ENSMUST00000168069 556 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm23576-201ENSMUST00000179918 110 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm9192-201ENSMUST00000183221 985 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Mir8093-201ENSMUST00000185043 137 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Gm45094-201ENSMUST00000207013 617 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.09□□□□□ -0.47
Cxcl12P40224 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcl12P40224 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cxcl12P40224 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Cxcl12P40224 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.08□□□□□ -0.47
Cxcl12P40224 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cxcl12P40224 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cxcl12P40224 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.08□□□□□ -0.48
Cxcl12P40224 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cxcl12P40224 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.08□□□□□ -0.48
Cxcl12P40224 Gm23255-201ENSMUST00000102244 110 ntBASIC12.08□□□□□ -0.48
Cxcl12P40224 Gm4294-201ENSMUST00000105169 614 ntBASIC12.08□□□□□ -0.48
Cxcl12P40224 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Gm13039-201ENSMUST00000118638 794 ntBASIC12.08□□□□□ -0.48
Cxcl12P40224 Gm15329-201ENSMUST00000121408 155 ntBASIC12.08□□□□□ -0.48
Cxcl12P40224 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.08□□□□□ -0.48
Cxcl12P40224 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.08□□□□□ -0.48
Cxcl12P40224 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Cxcl12P40224 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cxcl12P40224 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Gm8255-201ENSMUST00000218693 305 ntBASIC12.08□□□□□ -0.48
Cxcl12P40224 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.08□□□□□ -0.48
Cxcl12P40224 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cxcl12P40224 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.08□□□□□ -0.48
Cxcl12P40224 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cxcl12P40224 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cxcl12P40224 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.08□□□□□ -0.48
Cxcl12P40224 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cxcl12P40224 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cxcl12P40224 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cxcl12P40224 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms