Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Traf2P39429 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Traf2P39429 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Traf2P39429 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Traf2P39429 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Traf2P39429 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Traf2P39429 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Traf2P39429 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Traf2P39429 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.86□□□□□ -0.51
Traf2P39429 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Traf2P39429 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Traf2P39429 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.86□□□□□ -0.51
Traf2P39429 Gm23596-201ENSMUST00000104304 132 ntBASIC11.86□□□□□ -0.51
Traf2P39429 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Traf2P39429 Gm7857-201ENSMUST00000117957 358 ntBASIC11.86□□□□□ -0.51
Traf2P39429 Gm12217-201ENSMUST00000118858 696 ntBASIC11.86□□□□□ -0.51
Traf2P39429 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Traf2P39429 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.86□□□□□ -0.51
Traf2P39429 Gm27552-201ENSMUST00000183351 62 ntBASIC11.86□□□□□ -0.51
Traf2P39429 Gm27844-201ENSMUST00000183613 62 ntBASIC11.86□□□□□ -0.51
Traf2P39429 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.86□□□□□ -0.51
Traf2P39429 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.86□□□□□ -0.51
Traf2P39429 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.86□□□□□ -0.51
Traf2P39429 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.86□□□□□ -0.51
Traf2P39429 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.86□□□□□ -0.51
Traf2P39429 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.86□□□□□ -0.51
Traf2P39429 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Traf2P39429 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Traf2P39429 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Traf2P39429 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.85□□□□□ -0.51
Traf2P39429 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Traf2P39429 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Traf2P39429 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Traf2P39429 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.85□□□□□ -0.51
Traf2P39429 Gm11660-201ENSMUST00000120955 412 ntBASIC11.85□□□□□ -0.51
Traf2P39429 Gm14441-201ENSMUST00000121960 540 ntBASIC11.85□□□□□ -0.51
Traf2P39429 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.85□□□□□ -0.51
Traf2P39429 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Gm9192-201ENSMUST00000183221 985 ntBASIC11.85□□□□□ -0.51
Traf2P39429 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Traf2P39429 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Traf2P39429 Gm3332-201ENSMUST00000189337 928 ntBASIC11.85□□□□□ -0.51
Traf2P39429 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Traf2P39429 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Traf2P39429 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Traf2P39429 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.85□□□□□ -0.51
Traf2P39429 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Traf2P39429 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Traf2P39429 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Traf2P39429 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Traf2P39429 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Traf2P39429 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Traf2P39429 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms