Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.93□□□□□ -0.66
Hoxc5P32043 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxc5P32043 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxc5P32043 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.93□□□□□ -0.66
Hoxc5P32043 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxc5P32043 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxc5P32043 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxc5P32043 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.93□□□□□ -0.66
Hoxc5P32043 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxc5P32043 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hoxc5P32043 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxc5P32043 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.93□□□□□ -0.66
Hoxc5P32043 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hoxc5P32043 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hoxc5P32043 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.93□□□□□ -0.66
Hoxc5P32043 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.92□□□□□ -0.66
Hoxc5P32043 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hoxc5P32043 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.92□□□□□ -0.66
Hoxc5P32043 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm11930-201ENSMUST00000117788 190 ntBASIC10.92□□□□□ -0.66
Hoxc5P32043 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm6963-201ENSMUST00000147879 379 ntBASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.92□□□□□ -0.66
Hoxc5P32043 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.92□□□□□ -0.66
Hoxc5P32043 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.92□□□□□ -0.66
Hoxc5P32043 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.92□□□□□ -0.66
Hoxc5P32043 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.92□□□□□ -0.66
Hoxc5P32043 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hoxc5P32043 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Hoxc5P32043 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.92□□□□□ -0.66
Hoxc5P32043 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hoxc5P32043 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc5P32043 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.92□□□□□ -0.66
Hoxc5P32043 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.91□□□□□ -0.66
Hoxc5P32043 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms