Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.15□□□□□ -0.79
Slc6a1P31648 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.15□□□□□ -0.79
Slc6a1P31648 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Slc6a1P31648 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.14□□□□□ -0.79
Slc6a1P31648 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.14□□□□□ -0.79
Slc6a1P31648 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.14□□□□□ -0.79
Slc6a1P31648 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Gm27682-201ENSMUST00000183930 110 ntBASIC10.14□□□□□ -0.79
Slc6a1P31648 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.14□□□□□ -0.79
Slc6a1P31648 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Slc6a1P31648 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.14□□□□□ -0.79
Slc6a1P31648 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.14□□□□□ -0.79
Slc6a1P31648 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Slc6a1P31648 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Rgr-203ENSMUST00000225070 4704 ntBASIC10.14□□□□□ -0.79
Slc6a1P31648 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Slc6a1P31648 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.13□□□□□ -0.79
Slc6a1P31648 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm5187-201ENSMUST00000117317 991 ntBASIC10.13□□□□□ -0.79
Slc6a1P31648 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm23119-201ENSMUST00000158610 140 ntBASIC10.13□□□□□ -0.79
Slc6a1P31648 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.13□□□□□ -0.79
Slc6a1P31648 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.13□□□□□ -0.79
Slc6a1P31648 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm45331-201ENSMUST00000209868 554 ntBASIC10.13□□□□□ -0.79
Slc6a1P31648 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms