Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RaraP11416 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RaraP11416 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Gm27046-201ENSMUST00000182160 463 ntBASIC12.72□□□□□ -0.37
RaraP11416 Mir8109-201ENSMUST00000184375 117 ntBASIC12.72□□□□□ -0.37
RaraP11416 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.72□□□□□ -0.37
RaraP11416 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Gm45598-202ENSMUST00000210719 986 ntBASIC12.72□□□□□ -0.37
RaraP11416 Gm21769-201ENSMUST00000211922 111 ntBASIC12.72□□□□□ -0.37
RaraP11416 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.72□□□□□ -0.37
RaraP11416 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.72□□□□□ -0.37
RaraP11416 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.72□□□□□ -0.37
RaraP11416 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.72□□□□□ -0.37
RaraP11416 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RaraP11416 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RaraP11416 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.71□□□□□ -0.37
RaraP11416 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RaraP11416 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.71□□□□□ -0.37
RaraP11416 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RaraP11416 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.71□□□□□ -0.37
RaraP11416 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.71□□□□□ -0.37
RaraP11416 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Gm42660-201ENSMUST00000197733 947 ntBASIC12.71□□□□□ -0.37
RaraP11416 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
RaraP11416 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.71□□□□□ -0.37
RaraP11416 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.71□□□□□ -0.37
RaraP11416 Gm7399-201ENSMUST00000032395 858 ntBASIC12.71□□□□□ -0.37
RaraP11416 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
RaraP11416 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.71□□□□□ -0.37
RaraP11416 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RaraP11416 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RaraP11416 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
RaraP11416 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RaraP11416 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.71□□□□□ -0.38
RaraP11416 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
RaraP11416 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.71□□□□□ -0.38
RaraP11416 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RaraP11416 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
RaraP11416 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.7□□□□□ -0.38
RaraP11416 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.7□□□□□ -0.38
RaraP11416 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Gm26286-201ENSMUST00000104166 134 ntBASIC12.7□□□□□ -0.38
RaraP11416 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RaraP11416 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RaraP11416 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.7□□□□□ -0.38
RaraP11416 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
RaraP11416 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
RaraP11416 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.7□□□□□ -0.38
RaraP11416 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RaraP11416 Gm45865-201ENSMUST00000211815 945 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms