Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Gm43307-201ENSMUST00000199465 2371 ntBASIC8.04□□□□□ -1.12
Smim1P0C8K7 Gm45041-201ENSMUST00000207366 3108 ntBASIC8.04□□□□□ -1.12
Smim1P0C8K7 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Gm38357-201ENSMUST00000195382 2464 ntBASIC8.04□□□□□ -1.12
Smim1P0C8K7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC8.04□□□□□ -1.12
Smim1P0C8K7 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Gm43127-201ENSMUST00000195890 2789 ntBASIC8.04□□□□□ -1.12
Smim1P0C8K7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Gm17208-201ENSMUST00000168388 535 ntBASIC8.04□□□□□ -1.12
Smim1P0C8K7 Gm27331-201ENSMUST00000183705 60 ntBASIC8.04□□□□□ -1.12
Smim1P0C8K7 Gm37042-201ENSMUST00000193816 581 ntBASIC8.04□□□□□ -1.12
Smim1P0C8K7 Gm17931-201ENSMUST00000208132 634 ntBASIC8.04□□□□□ -1.12
Smim1P0C8K7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Smim1P0C8K7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Dopey2-207ENSMUST00000227156 7340 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Gm13315-201ENSMUST00000120376 991 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 Gm14767-201ENSMUST00000121559 586 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Gm38092-201ENSMUST00000195600 653 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 Gm44397-201ENSMUST00000195950 113 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Gm7183-201ENSMUST00000213870 1005 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 CT009713.10-202ENSMUST00000225734 696 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 Dhrs4-202ENSMUST00000226168 828 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Gm10175-201ENSMUST00000086013 645 ntBASIC8.03□□□□□ -1.12
Smim1P0C8K7 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smim1P0C8K7 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC8.03□□□□□ -1.12
Smim1P0C8K7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms