Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.14□□□□□ -0.63
ApoeP08226 Gm8762-201ENSMUST00000193486 339 ntBASIC11.14□□□□□ -0.63
ApoeP08226 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
ApoeP08226 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.14□□□□□ -0.63
ApoeP08226 Gm19994-201ENSMUST00000217086 586 ntBASIC11.14□□□□□ -0.63
ApoeP08226 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
ApoeP08226 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.14□□□□□ -0.63
ApoeP08226 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.14□□□□□ -0.63
ApoeP08226 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
ApoeP08226 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
ApoeP08226 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ApoeP08226 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.13□□□□□ -0.63
ApoeP08226 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.13□□□□□ -0.63
ApoeP08226 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
ApoeP08226 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.13□□□□□ -0.63
ApoeP08226 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
ApoeP08226 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.13□□□□□ -0.63
ApoeP08226 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Gm12138-201ENSMUST00000122180 951 ntBASIC11.13□□□□□ -0.63
ApoeP08226 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.13□□□□□ -0.63
ApoeP08226 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.13□□□□□ -0.63
ApoeP08226 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.13□□□□□ -0.63
ApoeP08226 Gm9192-201ENSMUST00000183221 985 ntBASIC11.13□□□□□ -0.63
ApoeP08226 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.13□□□□□ -0.63
ApoeP08226 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Gm18893-201ENSMUST00000198416 943 ntBASIC11.13□□□□□ -0.63
ApoeP08226 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
ApoeP08226 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.13□□□□□ -0.63
ApoeP08226 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
ApoeP08226 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ApoeP08226 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
ApoeP08226 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.12□□□□□ -0.63
ApoeP08226 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms