Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.51□□□□□ -0.73
P06344 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.51□□□□□ -0.73
P06344 Gm13461-201ENSMUST00000120980 662 ntBASIC10.51□□□□□ -0.73
P06344 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.51□□□□□ -0.73
P06344 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P06344 Gm4310-201ENSMUST00000177847 889 ntBASIC10.51□□□□□ -0.73
P06344 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.51□□□□□ -0.73
P06344 Gm19353-201ENSMUST00000184561 445 ntBASIC10.51□□□□□ -0.73
P06344 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.51□□□□□ -0.73
P06344 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.51□□□□□ -0.73
P06344 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.51□□□□□ -0.73
P06344 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.51□□□□□ -0.73
P06344 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.51□□□□□ -0.73
P06344 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
P06344 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.51□□□□□ -0.73
P06344 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.51□□□□□ -0.73
P06344 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
P06344 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.51□□□□□ -0.73
P06344 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P06344 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
P06344 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.5□□□□□ -0.73
P06344 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.5□□□□□ -0.73
P06344 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.5□□□□□ -0.73
P06344 Gm13045-201ENSMUST00000119019 712 ntBASIC10.5□□□□□ -0.73
P06344 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.5□□□□□ -0.73
P06344 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.5□□□□□ -0.73
P06344 Gm37246-201ENSMUST00000192665 835 ntBASIC10.5□□□□□ -0.73
P06344 Gm37986-201ENSMUST00000193285 383 ntBASIC10.5□□□□□ -0.73
P06344 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.5□□□□□ -0.73
P06344 Gm3786-201ENSMUST00000202659 378 ntBASIC10.5□□□□□ -0.73
P06344 Gm44100-201ENSMUST00000204329 436 ntBASIC10.5□□□□□ -0.73
P06344 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.5□□□□□ -0.73
P06344 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.5□□□□□ -0.73
P06344 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
P06344 Gm45575-201ENSMUST00000210283 548 ntBASIC10.5□□□□□ -0.73
P06344 Gm2553-201ENSMUST00000215986 605 ntBASIC10.5□□□□□ -0.73
P06344 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P06344 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.5□□□□□ -0.73
P06344 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P06344 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
P06344 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P06344 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P06344 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
P06344 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P06344 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
P06344 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
P06344 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms