Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vti1aO89116 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.75□□□□□ -0.37
Vti1aO89116 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.75□□□□□ -0.37
Vti1aO89116 Mir7686-201ENSMUST00000200604 57 ntBASIC12.75□□□□□ -0.37
Vti1aO89116 Gm8956-201ENSMUST00000203939 825 ntBASIC12.75□□□□□ -0.37
Vti1aO89116 Gm45219-201ENSMUST00000205602 465 ntBASIC12.75□□□□□ -0.37
Vti1aO89116 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.75□□□□□ -0.37
Vti1aO89116 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Vti1aO89116 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.75□□□□□ -0.37
Vti1aO89116 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vti1aO89116 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.74□□□□□ -0.37
Vti1aO89116 Map1b-203ENSMUST00000223725 2669 ntBASIC12.74□□□□□ -0.37
Vti1aO89116 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Vti1aO89116 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Gm11956-201ENSMUST00000119525 512 ntBASIC12.74□□□□□ -0.37
Vti1aO89116 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.74□□□□□ -0.37
Vti1aO89116 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.74□□□□□ -0.37
Vti1aO89116 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.74□□□□□ -0.37
Vti1aO89116 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.74□□□□□ -0.37
Vti1aO89116 Gm27530-201ENSMUST00000184096 98 ntBASIC12.74□□□□□ -0.37
Vti1aO89116 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.74□□□□□ -0.37
Vti1aO89116 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.74□□□□□ -0.37
Vti1aO89116 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.74□□□□□ -0.37
Vti1aO89116 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.74□□□□□ -0.37
Vti1aO89116 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Gm19287-201ENSMUST00000203190 358 ntBASIC12.74□□□□□ -0.37
Vti1aO89116 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Vti1aO89116 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.74□□□□□ -0.37
Vti1aO89116 Gm45398-201ENSMUST00000210561 165 ntBASIC12.74□□□□□ -0.37
Vti1aO89116 Gm9797-202ENSMUST00000218003 294 ntBASIC12.74□□□□□ -0.37
Vti1aO89116 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.74□□□□□ -0.37
Vti1aO89116 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vti1aO89116 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vti1aO89116 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vti1aO89116 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.74□□□□□ -0.37
Vti1aO89116 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1aO89116 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Vti1aO89116 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Vti1aO89116 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.73□□□□□ -0.37
Vti1aO89116 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vti1aO89116 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Vti1aO89116 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Vti1aO89116 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vti1aO89116 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.73□□□□□ -0.37
Vti1aO89116 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Vti1aO89116 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Vti1aO89116 Gm8365-201ENSMUST00000197334 648 ntBASIC12.73□□□□□ -0.37
Vti1aO89116 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1aO89116 Gm8285-201ENSMUST00000208293 759 ntBASIC12.73□□□□□ -0.37
Vti1aO89116 Gm45550-201ENSMUST00000209380 946 ntBASIC12.73□□□□□ -0.37
Vti1aO89116 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.73□□□□□ -0.37
Vti1aO89116 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.73□□□□□ -0.37
Vti1aO89116 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms