Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cops6O88545 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cops6O88545 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cops6O88545 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cops6O88545 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops6O88545 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cops6O88545 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Cops6O88545 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops6O88545 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops6O88545 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops6O88545 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.33□□□□□ -0.12
Cops6O88545 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops6O88545 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cops6O88545 Gm20495-201ENSMUST00000173902 235 ntBASIC14.33□□□□□ -0.12
Cops6O88545 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.33□□□□□ -0.12
Cops6O88545 Gm29410-201ENSMUST00000188383 694 ntBASIC14.33□□□□□ -0.12
Cops6O88545 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.33□□□□□ -0.12
Cops6O88545 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.33□□□□□ -0.12
Cops6O88545 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC14.33□□□□□ -0.12
Cops6O88545 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.33□□□□□ -0.12
Cops6O88545 Gm5996-201ENSMUST00000211110 718 ntBASIC14.33□□□□□ -0.12
Cops6O88545 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.33□□□□□ -0.12
Cops6O88545 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Cops6O88545 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops6O88545 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Cops6O88545 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.33□□□□□ -0.12
Cops6O88545 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Cops6O88545 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops6O88545 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops6O88545 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.33□□□□□ -0.12
Cops6O88545 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops6O88545 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cops6O88545 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cops6O88545 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.32□□□□□ -0.12
Cops6O88545 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.32□□□□□ -0.12
Cops6O88545 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.32□□□□□ -0.12
Cops6O88545 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.32□□□□□ -0.12
Cops6O88545 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.32□□□□□ -0.12
Cops6O88545 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.32□□□□□ -0.12
Cops6O88545 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.32□□□□□ -0.12
Cops6O88545 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cops6O88545 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.32□□□□□ -0.12
Cops6O88545 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Cops6O88545 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cops6O88545 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.31□□□□□ -0.12
Cops6O88545 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cops6O88545 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cops6O88545 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Gm15549-201ENSMUST00000121595 622 ntBASIC14.31□□□□□ -0.12
Cops6O88545 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Mir6407-201ENSMUST00000184510 101 ntBASIC14.31□□□□□ -0.12
Cops6O88545 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cops6O88545 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.31□□□□□ -0.12
Cops6O88545 Gm19091-201ENSMUST00000208120 978 ntBASIC14.31□□□□□ -0.12
Cops6O88545 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.31□□□□□ -0.12
Cops6O88545 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cops6O88545 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cops6O88545 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.31□□□□□ -0.12
Cops6O88545 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.31□□□□□ -0.12
Cops6O88545 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Cops6O88545 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops6O88545 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.31□□□□□ -0.12
Cops6O88545 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms