Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm15003-201ENSMUST00000118884 446 ntBASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Gm12783-201ENSMUST00000121425 397 ntBASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Mir7035-201ENSMUST00000184713 82 ntBASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Gm44216-201ENSMUST00000203942 157 ntBASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Gm43172-201ENSMUST00000202139 2137 ntBASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Gm5822-201ENSMUST00000161562 1378 ntBASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Snord23-201ENSMUST00000116828 109 ntBASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Gm19246-201ENSMUST00000173599 255 ntBASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Gm2594-201ENSMUST00000214774 742 ntBASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Gm7719-201ENSMUST00000182374 975 ntBASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Gm35713-201ENSMUST00000210516 199 ntBASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcf11G3X9Z4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcf11G3X9Z4 Mir1905-201ENSMUST00000122779 82 ntBASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Gm9487-201ENSMUST00000216600 472 ntBASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Btrc-209ENSMUST00000224478 2194 ntBASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcf11G3X9Z4 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Gm11578-201ENSMUST00000118530 459 ntBASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcf11G3X9Z4 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms