Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Gm27046-201ENSMUST00000182160 463 ntBASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Gm43962-201ENSMUST00000203898 190 ntBASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh9F8VPK8 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Gm20482-202ENSMUST00000174729 825 ntBASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Gm43438-201ENSMUST00000198133 379 ntBASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh9F8VPK8 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh9F8VPK8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms