Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a6B1AVK5 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Col4a6B1AVK5 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Col4a6B1AVK5 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Col4a6B1AVK5 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.9□□□□□ -0.51
Col4a6B1AVK5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col4a6B1AVK5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col4a6B1AVK5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col4a6B1AVK5 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm13204-201ENSMUST00000120110 821 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm6606-201ENSMUST00000193613 947 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm7904-201ENSMUST00000217049 465 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm5178-201ENSMUST00000219380 898 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.89□□□□□ -0.51
Col4a6B1AVK5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col4a6B1AVK5 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Gm22937-201ENSMUST00000103954 131 ntBASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Gm11475-201ENSMUST00000118482 476 ntBASIC11.88□□□□□ -0.51
Col4a6B1AVK5 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Gm3329-201ENSMUST00000159873 556 ntBASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Gm18010-201ENSMUST00000203553 202 ntBASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col4a6B1AVK5 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms