Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm4863-201ENSMUST00000196907 1381 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 CT025681.1-201ENSMUST00000225453 1855 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm11885-201ENSMUST00000118473 1428 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm27045-201ENSMUST00000182145 1402 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Lrit3-202ENSMUST00000185462 2456 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm36987-201ENSMUST00000194704 2979 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC2.57□□□□□ -2
Gm4559A4IF42 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Gm4559A4IF42 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC2.57□□□□□ -2
Gm4559A4IF42 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Gm4559A4IF42 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm34424-202ENSMUST00000214104 1652 ntTSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 AC122428.3-201ENSMUST00000215551 2290 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm9894-201ENSMUST00000171257 2904 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Gm4559A4IF42 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Gm4559A4IF42 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC2.57□□□□□ -2
Gm4559A4IF42 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Gm4559A4IF42 Rad51b-201ENSMUST00000079533 1759 ntTSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Dennd6a-205ENSMUST00000224378 2424 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Tmem161b-206ENSMUST00000225069 2414 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Ctse-202ENSMUST00000112411 1837 ntTSL 5 BASIC2.57□□□□□ -2
Gm4559A4IF42 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Gm4559A4IF42 AC160028.2-201ENSMUST00000218937 2519 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Gm26135-201ENSMUST00000101993 72 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
Gm4559A4IF42 Mir190b-201ENSMUST00000104803 80 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Gm7290-201ENSMUST00000104990 617 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC2.57□□□□□ -2
Gm4559A4IF42 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Gm4559A4IF42 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm23652-201ENSMUST00000116752 107 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Gm14865-201ENSMUST00000117523 494 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Gm9432-201ENSMUST00000117810 759 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Gm13550-201ENSMUST00000118185 525 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Gm4559A4IF42 Gm1826-201ENSMUST00000118646 1162 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Gm6382-201ENSMUST00000118873 942 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Gm15047-201ENSMUST00000118891 454 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Gm15211-201ENSMUST00000118932 528 ntBASIC2.57□□□□□ -2
Gm4559A4IF42 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms