Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm15549-201ENSMUST00000121595 622 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm4654-201ENSMUST00000183305 982 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.28□□□□□ -0.44
Scn1aA2APX8 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1aA2APX8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.27□□□□□ -0.44
Scn1aA2APX8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1aA2APX8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1aA2APX8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1aA2APX8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1aA2APX8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Scn1aA2APX8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1aA2APX8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Scn1aA2APX8 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.27□□□□□ -0.44
Scn1aA2APX8 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1aA2APX8 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.27□□□□□ -0.44
Scn1aA2APX8 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1aA2APX8 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1aA2APX8 Gm44315-201ENSMUST00000203041 219 ntBASIC12.27□□□□□ -0.44
Scn1aA2APX8 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.27□□□□□ -0.44
Scn1aA2APX8 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.27□□□□□ -0.44
Scn1aA2APX8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.27□□□□□ -0.45
Scn1aA2APX8 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.27□□□□□ -0.45
Scn1aA2APX8 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.27□□□□□ -0.45
Scn1aA2APX8 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.27□□□□□ -0.45
Scn1aA2APX8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Scn1aA2APX8 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.26□□□□□ -0.45
Scn1aA2APX8 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.26□□□□□ -0.45
Scn1aA2APX8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms