Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SrfQ9JM73 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SrfQ9JM73 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.58■□□□□ 0.72
SrfQ9JM73 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.58■□□□□ 0.72
SrfQ9JM73 Gm42569-201ENSMUST00000200539 472 ntBASIC19.58■□□□□ 0.72
SrfQ9JM73 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SrfQ9JM73 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SrfQ9JM73 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.57■□□□□ 0.72
SrfQ9JM73 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SrfQ9JM73 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SrfQ9JM73 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SrfQ9JM73 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.57■□□□□ 0.72
SrfQ9JM73 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.57■□□□□ 0.72
SrfQ9JM73 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.57■□□□□ 0.72
SrfQ9JM73 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.57■□□□□ 0.72
SrfQ9JM73 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.57■□□□□ 0.72
SrfQ9JM73 Gm42642-201ENSMUST00000200683 355 ntBASIC19.57■□□□□ 0.72
SrfQ9JM73 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SrfQ9JM73 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SrfQ9JM73 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SrfQ9JM73 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SrfQ9JM73 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.57■□□□□ 0.72
SrfQ9JM73 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SrfQ9JM73 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SrfQ9JM73 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SrfQ9JM73 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SrfQ9JM73 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SrfQ9JM73 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
SrfQ9JM73 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SrfQ9JM73 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SrfQ9JM73 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SrfQ9JM73 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SrfQ9JM73 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SrfQ9JM73 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SrfQ9JM73 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.55■□□□□ 0.72
SrfQ9JM73 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SrfQ9JM73 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SrfQ9JM73 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SrfQ9JM73 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SrfQ9JM73 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SrfQ9JM73 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SrfQ9JM73 Smad6-203ENSMUST00000179458 273 ntBASIC19.54■□□□□ 0.72
SrfQ9JM73 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SrfQ9JM73 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.54■□□□□ 0.72
SrfQ9JM73 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SrfQ9JM73 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SrfQ9JM73 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.53■□□□□ 0.72
SrfQ9JM73 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SrfQ9JM73 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SrfQ9JM73 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SrfQ9JM73 Gm10849-201ENSMUST00000100397 618 ntBASIC19.53■□□□□ 0.72
SrfQ9JM73 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.53■□□□□ 0.72
SrfQ9JM73 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SrfQ9JM73 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.53■□□□□ 0.72
SrfQ9JM73 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SrfQ9JM73 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.53■□□□□ 0.72
SrfQ9JM73 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SrfQ9JM73 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SrfQ9JM73 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SrfQ9JM73 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SrfQ9JM73 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SrfQ9JM73 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SrfQ9JM73 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SrfQ9JM73 Gm40848-201ENSMUST00000221998 324 ntBASIC19.52■□□□□ 0.72
SrfQ9JM73 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.52■□□□□ 0.72
SrfQ9JM73 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SrfQ9JM73 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SrfQ9JM73 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SrfQ9JM73 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SrfQ9JM73 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SrfQ9JM73 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.51■□□□□ 0.71
SrfQ9JM73 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.51■□□□□ 0.71
SrfQ9JM73 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SrfQ9JM73 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SrfQ9JM73 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SrfQ9JM73 Gm26571-201ENSMUST00000181399 666 ntBASIC19.51■□□□□ 0.71
SrfQ9JM73 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SrfQ9JM73 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SrfQ9JM73 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SrfQ9JM73 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SrfQ9JM73 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SrfQ9JM73 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SrfQ9JM73 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SrfQ9JM73 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
SrfQ9JM73 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.5■□□□□ 0.71
SrfQ9JM73 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SrfQ9JM73 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SrfQ9JM73 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SrfQ9JM73 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SrfQ9JM73 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.49■□□□□ 0.71
SrfQ9JM73 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SrfQ9JM73 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.49■□□□□ 0.71
SrfQ9JM73 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SrfQ9JM73 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SrfQ9JM73 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SrfQ9JM73 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SrfQ9JM73 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.48■□□□□ 0.71
SrfQ9JM73 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SrfQ9JM73 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SrfQ9JM73 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms