Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps33aQ9D2N9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps33aQ9D2N9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps33aQ9D2N9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps33aQ9D2N9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps33aQ9D2N9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.8■■□□□ 1.08
Vps33aQ9D2N9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.8■■□□□ 1.08
Vps33aQ9D2N9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps33aQ9D2N9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps33aQ9D2N9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps33aQ9D2N9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.79■■□□□ 1.08
Vps33aQ9D2N9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Vps33aQ9D2N9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps33aQ9D2N9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Vps33aQ9D2N9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps33aQ9D2N9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.79■■□□□ 1.08
Vps33aQ9D2N9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Vps33aQ9D2N9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Vps33aQ9D2N9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps33aQ9D2N9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.78■■□□□ 1.08
Vps33aQ9D2N9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps33aQ9D2N9 Terc-201ENSMUST00000082862 423 ntBASIC21.78■■□□□ 1.08
Vps33aQ9D2N9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps33aQ9D2N9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps33aQ9D2N9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps33aQ9D2N9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps33aQ9D2N9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps33aQ9D2N9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps33aQ9D2N9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vps33aQ9D2N9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.77■■□□□ 1.08
Vps33aQ9D2N9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps33aQ9D2N9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Vps33aQ9D2N9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps33aQ9D2N9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps33aQ9D2N9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Vps33aQ9D2N9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps33aQ9D2N9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps33aQ9D2N9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps33aQ9D2N9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps33aQ9D2N9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps33aQ9D2N9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps33aQ9D2N9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Vps33aQ9D2N9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps33aQ9D2N9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps33aQ9D2N9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps33aQ9D2N9 Gm8503-201ENSMUST00000118131 455 ntBASIC21.75■■□□□ 1.07
Vps33aQ9D2N9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps33aQ9D2N9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Vps33aQ9D2N9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vps33aQ9D2N9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vps33aQ9D2N9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps33aQ9D2N9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps33aQ9D2N9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps33aQ9D2N9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Vps33aQ9D2N9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
Vps33aQ9D2N9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps33aQ9D2N9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vps33aQ9D2N9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vps33aQ9D2N9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps33aQ9D2N9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps33aQ9D2N9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.73■■□□□ 1.07
Vps33aQ9D2N9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Vps33aQ9D2N9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.73■■□□□ 1.07
Vps33aQ9D2N9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps33aQ9D2N9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.73■■□□□ 1.07
Vps33aQ9D2N9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps33aQ9D2N9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps33aQ9D2N9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps33aQ9D2N9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps33aQ9D2N9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps33aQ9D2N9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33aQ9D2N9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33aQ9D2N9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Vps33aQ9D2N9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Vps33aQ9D2N9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33aQ9D2N9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33aQ9D2N9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33aQ9D2N9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Vps33aQ9D2N9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps33aQ9D2N9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.7■■□□□ 1.06
Vps33aQ9D2N9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33aQ9D2N9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Vps33aQ9D2N9 Golph3-205ENSMUST00000228671 2842 ntBASIC21.7■■□□□ 1.06
Vps33aQ9D2N9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33aQ9D2N9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33aQ9D2N9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.7■■□□□ 1.06
Vps33aQ9D2N9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33aQ9D2N9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps33aQ9D2N9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33aQ9D2N9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms