Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb4Q91XX6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhgb4Q91XX6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb4Q91XX6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhgb4Q91XX6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb4Q91XX6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb4Q91XX6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb4Q91XX6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhgb4Q91XX6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhgb4Q91XX6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb4Q91XX6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb4Q91XX6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb4Q91XX6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb4Q91XX6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb4Q91XX6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb4Q91XX6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb4Q91XX6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.72■■□□□ 1.07
Pcdhgb4Q91XX6 Gm10232-201ENSMUST00000089221 720 ntBASIC21.72■■□□□ 1.07
Pcdhgb4Q91XX6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb4Q91XX6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb4Q91XX6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.72■■□□□ 1.07
Pcdhgb4Q91XX6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhgb4Q91XX6 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.7■■□□□ 1.07
Pcdhgb4Q91XX6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Pcdhgb4Q91XX6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb4Q91XX6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb4Q91XX6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb4Q91XX6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb4Q91XX6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb4Q91XX6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb4Q91XX6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.69■■□□□ 1.06
Pcdhgb4Q91XX6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb4Q91XX6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb4Q91XX6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcdhgb4Q91XX6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb4Q91XX6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb4Q91XX6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb4Q91XX6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.66■■□□□ 1.06
Pcdhgb4Q91XX6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb4Q91XX6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcdhgb4Q91XX6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdhgb4Q91XX6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.66■■□□□ 1.06
Pcdhgb4Q91XX6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb4Q91XX6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb4Q91XX6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb4Q91XX6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhgb4Q91XX6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhgb4Q91XX6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Pcdhgb4Q91XX6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhgb4Q91XX6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms