Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.41■□□□□ 0.86
Vsx1Q91V10 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx1Q91V10 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx1Q91V10 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.41■□□□□ 0.86
Vsx1Q91V10 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.41■□□□□ 0.86
Vsx1Q91V10 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.41■□□□□ 0.86
Vsx1Q91V10 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx1Q91V10 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx1Q91V10 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx1Q91V10 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.4■□□□□ 0.86
Vsx1Q91V10 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vsx1Q91V10 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Vsx1Q91V10 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vsx1Q91V10 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vsx1Q91V10 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vsx1Q91V10 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vsx1Q91V10 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vsx1Q91V10 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.39■□□□□ 0.85
Vsx1Q91V10 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.38■□□□□ 0.85
Vsx1Q91V10 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx1Q91V10 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.38■□□□□ 0.85
Vsx1Q91V10 Gm37179-201ENSMUST00000194862 823 ntBASIC20.38■□□□□ 0.85
Vsx1Q91V10 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx1Q91V10 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Vsx1Q91V10 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx1Q91V10 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Vsx1Q91V10 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx1Q91V10 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Vsx1Q91V10 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx1Q91V10 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vsx1Q91V10 Gm10849-201ENSMUST00000100397 618 ntBASIC20.37■□□□□ 0.85
Vsx1Q91V10 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Vsx1Q91V10 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.37■□□□□ 0.85
Vsx1Q91V10 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vsx1Q91V10 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Vsx1Q91V10 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.37■□□□□ 0.85
Vsx1Q91V10 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx1Q91V10 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx1Q91V10 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx1Q91V10 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx1Q91V10 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx1Q91V10 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.36■□□□□ 0.85
Vsx1Q91V10 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx1Q91V10 Gm10493-201ENSMUST00000097270 612 ntBASIC20.36■□□□□ 0.85
Vsx1Q91V10 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx1Q91V10 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Vsx1Q91V10 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx1Q91V10 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx1Q91V10 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx1Q91V10 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vsx1Q91V10 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vsx1Q91V10 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vsx1Q91V10 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.35■□□□□ 0.85
Vsx1Q91V10 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vsx1Q91V10 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Vsx1Q91V10 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Vsx1Q91V10 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.34■□□□□ 0.85
Vsx1Q91V10 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vsx1Q91V10 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.34■□□□□ 0.85
Vsx1Q91V10 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vsx1Q91V10 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vsx1Q91V10 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vsx1Q91V10 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.34■□□□□ 0.85
Vsx1Q91V10 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.33■□□□□ 0.85
Vsx1Q91V10 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Vsx1Q91V10 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vsx1Q91V10 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vsx1Q91V10 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vsx1Q91V10 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.33■□□□□ 0.84
Vsx1Q91V10 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.32■□□□□ 0.84
Vsx1Q91V10 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx1Q91V10 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx1Q91V10 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx1Q91V10 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx1Q91V10 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Vsx1Q91V10 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.32■□□□□ 0.84
Vsx1Q91V10 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx1Q91V10 Gm42642-201ENSMUST00000200683 355 ntBASIC20.32■□□□□ 0.84
Vsx1Q91V10 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.32■□□□□ 0.84
Vsx1Q91V10 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Vsx1Q91V10 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx1Q91V10 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx1Q91V10 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx1Q91V10 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.31■□□□□ 0.84
Vsx1Q91V10 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.31■□□□□ 0.84
Vsx1Q91V10 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx1Q91V10 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx1Q91V10 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vsx1Q91V10 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vsx1Q91V10 Gm26833-201ENSMUST00000180899 440 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms