Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
StrcQ8VIM6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
StrcQ8VIM6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
StrcQ8VIM6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
StrcQ8VIM6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC25.3■■□□□ 1.64
StrcQ8VIM6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
StrcQ8VIM6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
StrcQ8VIM6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
StrcQ8VIM6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
StrcQ8VIM6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
StrcQ8VIM6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC25.29■■□□□ 1.64
StrcQ8VIM6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC25.29■■□□□ 1.64
StrcQ8VIM6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
StrcQ8VIM6 Gm10209-201ENSMUST00000203397 1607 ntBASIC25.29■■□□□ 1.64
StrcQ8VIM6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
StrcQ8VIM6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
StrcQ8VIM6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC25.27■■□□□ 1.64
StrcQ8VIM6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
StrcQ8VIM6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
StrcQ8VIM6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
StrcQ8VIM6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
StrcQ8VIM6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
StrcQ8VIM6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC25.26■■□□□ 1.63
StrcQ8VIM6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
StrcQ8VIM6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
StrcQ8VIM6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
StrcQ8VIM6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
StrcQ8VIM6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
StrcQ8VIM6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
StrcQ8VIM6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
StrcQ8VIM6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
StrcQ8VIM6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
StrcQ8VIM6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.24■■□□□ 1.63
StrcQ8VIM6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
StrcQ8VIM6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
StrcQ8VIM6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC25.23■■□□□ 1.63
StrcQ8VIM6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
StrcQ8VIM6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
StrcQ8VIM6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
StrcQ8VIM6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
StrcQ8VIM6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
StrcQ8VIM6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC25.22■■□□□ 1.63
StrcQ8VIM6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
StrcQ8VIM6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
StrcQ8VIM6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
StrcQ8VIM6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
StrcQ8VIM6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
StrcQ8VIM6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
StrcQ8VIM6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
StrcQ8VIM6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
StrcQ8VIM6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
StrcQ8VIM6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
StrcQ8VIM6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC25.21■■□□□ 1.63
StrcQ8VIM6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
StrcQ8VIM6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
StrcQ8VIM6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
StrcQ8VIM6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
StrcQ8VIM6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
StrcQ8VIM6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
StrcQ8VIM6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
StrcQ8VIM6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC25.2■■□□□ 1.62
StrcQ8VIM6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
StrcQ8VIM6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
StrcQ8VIM6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
StrcQ8VIM6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
StrcQ8VIM6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
StrcQ8VIM6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC25.19■■□□□ 1.62
StrcQ8VIM6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC25.19■■□□□ 1.62
StrcQ8VIM6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
StrcQ8VIM6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
StrcQ8VIM6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
StrcQ8VIM6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
StrcQ8VIM6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
StrcQ8VIM6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
StrcQ8VIM6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC25.18■■□□□ 1.62
StrcQ8VIM6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
StrcQ8VIM6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC25.18■■□□□ 1.62
StrcQ8VIM6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
StrcQ8VIM6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC25.18■■□□□ 1.62
StrcQ8VIM6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
StrcQ8VIM6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC25.17■■□□□ 1.62
StrcQ8VIM6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
StrcQ8VIM6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
StrcQ8VIM6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
StrcQ8VIM6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
StrcQ8VIM6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC25.15■■□□□ 1.62
StrcQ8VIM6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms