Protein–RNA interactions for Protein: Q8CE96

Trmt6, tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt6Q8CE96 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trmt6Q8CE96 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trmt6Q8CE96 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trmt6Q8CE96 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.34■□□□□ 0.53
Trmt6Q8CE96 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trmt6Q8CE96 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trmt6Q8CE96 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trmt6Q8CE96 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trmt6Q8CE96 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trmt6Q8CE96 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trmt6Q8CE96 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trmt6Q8CE96 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trmt6Q8CE96 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trmt6Q8CE96 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trmt6Q8CE96 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trmt6Q8CE96 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.33■□□□□ 0.52
Trmt6Q8CE96 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trmt6Q8CE96 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.33■□□□□ 0.52
Trmt6Q8CE96 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trmt6Q8CE96 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trmt6Q8CE96 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trmt6Q8CE96 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trmt6Q8CE96 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trmt6Q8CE96 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.33■□□□□ 0.52
Trmt6Q8CE96 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trmt6Q8CE96 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trmt6Q8CE96 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trmt6Q8CE96 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.31■□□□□ 0.52
Trmt6Q8CE96 Gm12366-201ENSMUST00000121722 873 ntBASIC18.31■□□□□ 0.52
Trmt6Q8CE96 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.31■□□□□ 0.52
Trmt6Q8CE96 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.31■□□□□ 0.52
Trmt6Q8CE96 Gm5786-201ENSMUST00000085368 882 ntBASIC18.31■□□□□ 0.52
Trmt6Q8CE96 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trmt6Q8CE96 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trmt6Q8CE96 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trmt6Q8CE96 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.31■□□□□ 0.52
Trmt6Q8CE96 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.3■□□□□ 0.52
Trmt6Q8CE96 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trmt6Q8CE96 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trmt6Q8CE96 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trmt6Q8CE96 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trmt6Q8CE96 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trmt6Q8CE96 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trmt6Q8CE96 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trmt6Q8CE96 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trmt6Q8CE96 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trmt6Q8CE96 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trmt6Q8CE96 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trmt6Q8CE96 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trmt6Q8CE96 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.28■□□□□ 0.52
Trmt6Q8CE96 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trmt6Q8CE96 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Trmt6Q8CE96 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trmt6Q8CE96 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trmt6Q8CE96 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trmt6Q8CE96 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
Trmt6Q8CE96 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trmt6Q8CE96 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trmt6Q8CE96 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.26■□□□□ 0.51
Trmt6Q8CE96 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trmt6Q8CE96 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trmt6Q8CE96 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.26■□□□□ 0.51
Trmt6Q8CE96 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.26■□□□□ 0.51
Trmt6Q8CE96 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trmt6Q8CE96 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trmt6Q8CE96 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trmt6Q8CE96 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trmt6Q8CE96 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trmt6Q8CE96 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trmt6Q8CE96 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trmt6Q8CE96 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trmt6Q8CE96 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms